The Gene Ontology in 2010: extensions and refinements.

Nucleic Acids Research
Gene Ontology Consortium

Abstract

The Gene Ontology (GO) Consortium (http://www.geneontology.org) (GOC) continues to develop, maintain and use a set of structured, controlled vocabularies for the annotation of genes, gene products and sequences. The GO ontologies are expanding both in content and in structure. Several new relationship types have been introduced and used, along with existing relationships, to create links between and within the GO domains. These improve the representation of biology, facilitate querying, and allow GO developers to systematically check for and correct inconsistencies within the GO. Gene product annotation using GO continues to increase both in the number of total annotations and in species coverage. GO tools, such as OBO-Edit, an ontology-editing tool, and AmiGO, the GOC ontology browser, have seen major improvements in functionality, speed and ease of use.

References

Jun 5, 2007·Bioinformatics·John Day-RichterSuzanna Lewis
Oct 10, 2008·Nucleic Acids Research·M Michael GromihaKazuhiko Fukui
Nov 27, 2008·Bioinformatics·Seth CarbonUNKNOWN Web Presence Working Group
Jul 7, 2009·PLoS Computational Biology·UNKNOWN Reference Genome Group of the Gene Ontology Consortium

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Citations

Jul 20, 2011·Plant Cell Reports·Sathiyamoorthy SubramaniyamYang Deok Chun
Nov 6, 2010·Mammalian Genome : Official Journal of the International Mammalian Genome Society·Marc GillespiePeter D'Eustachio
Mar 12, 2010·Molecular Genetics and Genomics : MGG·Jodi HirschmanDoug Howe
Jul 30, 2011·Journal of Biosciences·Parul Varma, Rakesh K Mishra
Aug 16, 2012·Translational Psychiatry·Y HeD Rujescu
Dec 15, 2010·Proceedings of the National Academy of Sciences of the United States of America·Aurélie LardenoisMichael Primig
Jun 10, 2010·Molecular & Cellular Proteomics : MCP·Satish KallappagoudarRakesh K Mishra
Aug 24, 2012·Journal of Neurotrauma·John B RedellPramod K Dash
Mar 6, 2012·Omics : a Journal of Integrative Biology·Joan Planas-IglesiasBaldo Oliva
Feb 19, 2011·Briefings in Bioinformatics·Louis du PlessisChristophe Dessimoz
Aug 30, 2011·Briefings in Bioinformatics·Pascale GaudetPaul D Thomas
Sep 11, 2012·Briefings in Bioinformatics·Chris I HunterSarah Hunter
Oct 25, 2011·Bioinformatics·Huaiyu MiPaul D Thomas
Nov 15, 2011·Bioinformatics·Edward Y ChenAvi Ma'ayan
Jan 31, 2012·Bioinformatics·Anne NiknejadMarc Robinson-Rechavi
Jul 31, 2010·Database : the Journal of Biological Databases and Curation·Bijay JassalPeter D'Eustachio
Mar 18, 2011·Database : the Journal of Biological Databases and Curation·Maria C CostanzoEurie L Hong
Oct 21, 2011·Database : the Journal of Biological Databases and Curation·Robin A HawLincoln D Stein
Mar 22, 2012·Database : the Journal of Biological Databases and Curation·Terry F HayamizuMartin Ringwald
Mar 22, 2012·Database : the Journal of Biological Databases and Curation·Julie ParkEurie L Hong
Mar 22, 2012·Database : the Journal of Biological Databases and Curation·Stanley J F LaulederkindHoward J Jacob
Aug 4, 2012·Database : the Journal of Biological Databases and Curation·Tanya Z BerardiniEva Huala
Dec 12, 2012·Database : the Journal of Biological Databases and Curation·Donghui LiEva Huala
Dec 12, 2012·Database : the Journal of Biological Databases and Curation·Cathy H WuW John Wilbur
Apr 20, 2013·Database : the Journal of Biological Databases and Curation·Mariana NevesUlf Leser
Jul 12, 2013·Database : the Journal of Biological Databases and Curation·Rama BalakrishnanJ Michael Cherry
Feb 9, 2013·Molecular Biology and Evolution·Andrew Paul HutchinsDiego Miranda-Saavedra
Nov 6, 2010·Nucleic Acids Research·Judith A BlakeUNKNOWN Mouse Genome Database Group
Nov 12, 2010·Nucleic Acids Research·David CroftLincoln Stein
Nov 3, 2010·Nucleic Acids Research·Yvonne BradfordMonte Westerfield
Nov 16, 2010·Nucleic Acids Research·Fiona M McCarthyShane C Burgess
Nov 11, 2010·Nucleic Acids Research·Jacqueline H FingerMartin Ringwald
Nov 26, 2010·Nucleic Acids Research·Ingrid M KeselerPeter D Karp
Nov 13, 2010·Nucleic Acids Research·Atanas KamburovRalf Herwig
Dec 1, 2010·Nucleic Acids Research·Donna MaglottTatiana Tatusova
Sep 21, 2010·Nucleic Acids Research·Emilie ChautardSylvie Ricard-Blum
Oct 16, 2010·Nucleic Acids Research·Chantal HuloPhilippe Le Mercier
Oct 12, 2010·Nucleic Acids Research·Darren A NataleCathy H Wu
Oct 26, 2010·Nucleic Acids Research·Robert M WaterhouseEvgenia V Kriventseva

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Software Mentioned

OBO
miSO browser
PAINT ( Phylogenetic Annotation INferencing Tool )
GOC
Edit
AmiGO

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