The glycosyltransferase repertoire of the spikemoss Selaginella moellendorffii and a comparative study of its cell wall.

PloS One
Jesper HarholtPeter Ulvskov

Abstract

Spike mosses are among the most basal vascular plants, and one species, Selaginella moellendorffii, was recently selected for full genome sequencing by the Joint Genome Institute (JGI). Glycosyltransferases (GTs) are involved in many aspects of a plant life, including cell wall biosynthesis, protein glycosylation, primary and secondary metabolism. Here, we present a comparative study of the S. moellendorffii genome across 92 GT families and an additional family (DUF266) likely to include GTs. The study encompasses the moss Physcomitrella patens, a non-vascular land plant, while rice and Arabidopsis represent commelinid and non-commelinid seed plants. Analysis of the subset of GT-families particularly relevant to cell wall polysaccharide biosynthesis was complemented by a detailed analysis of S. moellendorffii cell walls. The S. moellendorffii cell wall contains many of the same components as seed plant cell walls, but appears to differ somewhat in its detailed architecture. The S. moellendorffii genome encodes fewer GTs (287 GTs including DUF266s) than the reference genomes. In a few families, notably GT51 and GT78, S. moellendorffii GTs have no higher plant orthologs, but in most families S. moellendorffii GTs have clear ortho...Continue Reading

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Citations

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Jun 19, 2021·Communications Biology·Maria Dalgaard MikkelsenPeter Ulvskov

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Datasets Mentioned

BETA
GT34

Methods Mentioned

BETA
glycosylation

Software Mentioned

Adobe Illustrator
BLAST
Bioedit
CoMMP
rpsblast
proML
ClustalX
Phyre
CoMPP
PARVUS

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