The host-associated archaeome.

Nature Reviews. Microbiology
G. BorrelChristine Moissl-Eichinger

Abstract

Host-associated microbial communities have an important role in shaping the health and fitness of plants and animals. Most studies have focused on the bacterial, fungal or viral communities, but often the archaeal component has been neglected. The archaeal community, the so-called archaeome, is now increasingly recognized as an important component of host-associated microbiomes. It is composed of various lineages, including mainly Methanobacteriales and Methanomassiliicoccales (Euryarchaeota), as well as representatives of the Thaumarchaeota. Host-archaeome interactions have mostly been delineated from methanogenic archaea in the gastrointestinal tract, where they contribute to substantial methane production and are potentially also involved in disease-relevant processes. In this Review, we discuss the diversity and potential roles of the archaea associated with protists, plants and animals. We also present the current understanding of the archaeome in humans, the specific adaptations involved in interaction with the resident microbial community as well as with the host, and the roles of the archaeome in both health and disease.

References

Sep 3, 1977·Lancet·A HainesH Wiggins
Jun 15, 1992·Proceedings of the National Academy of Sciences of the United States of America·E F DeLong
Feb 1, 1992·Metabolism: Clinical and Experimental·M al-WaizR L Smith
Jun 1, 1991·Applied and Environmental Microbiology·H J GijzenC K Stumm
Jul 1, 1990·Journal of Clinical Microbiology·N BelayL Daniels
Sep 1, 1980·Applied and Environmental Microbiology·G D VogelsC K Stumm
Jan 1, 1982·Applied and Environmental Microbiology·T L MillerA J Macario
Dec 1, 1993·Journal of General Microbiology·M Müller
Nov 1, 1993·Scandinavian Journal of Gastroenterology·M J HudsonB S Drasar
Jun 25, 1996·Proceedings of the National Academy of Sciences of the United States of America·C M PrestonE F DeLong
Sep 11, 1999·Trends in Ecology & Evolution·A JoabssonB Wallén
Mar 11, 2000·Molecular Biology and Evolution·A H van HoekJ H Hackstein
Feb 15, 2001·Frontiers in Bioscience : a Journal and Virtual Library·A J Macario, E Conway De Macario
May 25, 2002·Science·Gayathri SrinivasanJoseph A Krzycki
Jan 24, 2003·Infection and Immunity·Paul B EckburgDavid A Relman
Oct 28, 2003·BioEssays : News and Reviews in Molecular, Cellular and Developmental Biology·Ricardo CavicchioliTorsten Thomas
Dec 25, 2003·Journal of UOEH·Hiroyuki MoriiTerumasa Nakamura
Apr 7, 2004·Proceedings of the National Academy of Sciences of the United States of America·Paul W LeppDavid A Relman
Apr 28, 2004·BioEssays : News and Reviews in Molecular, Cellular and Developmental Biology·William Martin
Jun 3, 2005·Nature Reviews. Microbiology·Christa SchleperMelanie Jonuscheit
Nov 19, 2005·American Journal of Physiology. Gastrointestinal and Liver Physiology·Mark PimentelJeffrey Conklin
Feb 14, 2006·Clinical Gastroenterology and Hepatology : the Official Clinical Practice Journal of the American Gastroenterological Association·Michael D LevittJohn Ruddy
Aug 18, 2006·Nature·S LeiningerC Schleper
Nov 23, 2006·Proceedings of the National Academy of Sciences of the United States of America·Steven J HallamEdward F DeLong
Dec 22, 2006·The Journal of Nutrition·Stephen J D O'KeefeTian van der Merwe
Mar 6, 2007·Nature Reviews. Microbiology·David L Valentine
Mar 27, 2007·Nature Reviews. Microbiology·Eugene RosenbergIlana Zilber-Rosenberg
Apr 3, 2007·The American Journal of Gastroenterology·Soumya ChatterjeeMark Pimentel
Jun 15, 2007·Proceedings of the National Academy of Sciences of the United States of America·Buck S SamuelJeffrey I Gordon
Jun 14, 2008·FEMS Microbiology Reviews·Ilana Zilber-Rosenberg, Eugene Rosenberg
Sep 2, 2008·International Journal of Medical Microbiology : IJMM·Everly Conway de Macario, Alberto J L Macario
Sep 2, 2008·Proceedings of the National Academy of Sciences of the United States of America·Brian V JonesJulian R Marchesi
Oct 25, 2008·Nucleic Acids Research·Zarraz May-Ping LeeThomas M Schmidt
Nov 1, 2008·The Journal of Microbiology·Young-Do NamJin-Woo Bae
May 26, 2009·Oral Surgery, Oral Medicine, Oral Pathology, Oral Radiology, and Endodontics·José F Siqueira, Isabela N Rôças
Jul 18, 2009·Nature Reviews. Microbiology·Alfons J M Stams, Caroline M Plugge
Oct 23, 2009·The ISME Journal·Jean-Christophe AuguetEmilio O Casamayor
Dec 3, 2009·The American Journal of Gastroenterology·Ashok AttaluriSatish S C Rao
May 5, 2010·Environmental Microbiology·Andrew P A OxleyBalbina Nogales
Dec 10, 1966·Nature·D H CallowayR D Mathews

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Citations

Oct 3, 2020·Computational and Structural Biotechnology Journal·Jihye JungChoong-Min Ryu
Feb 8, 2021·Bio Systems·František Baluška, Sherrie Lyons
Feb 2, 2021·Gut Microbes·Laura E McCoubreyAbdul W Basit
Apr 7, 2021·Probiotics and Antimicrobial Proteins·Nisha ChuphalVikas Kumar
Apr 16, 2021·PLoS Pathogens·Giorgia MoriAntje Blumenthal
May 1, 2021·Microorganisms·Gülbahar AbaramakWim Van den Ende
May 13, 2021·MSystems·Rebeca Domínguez-SantosRosario Gil
Jun 6, 2021·Nature Communications·Nika PendeSimonetta Gribaldo
Jun 26, 2021·Ageing Research Reviews·Mario F Munoz-PintoSandra M Cardoso
Jul 3, 2021·Animals : an Open Access Journal From MDPI·Mohamed ZeineldinJames Lowe
Jul 15, 2021·Biotechnology Advances·Laura E McCoubreyAbdul W Basit
Jul 21, 2021·MSystems·Alexander K UmbachJosh D Neufeld
Aug 8, 2021·Animals : an Open Access Journal From MDPI·Feilong DengYing Li
Aug 18, 2021·Animal Science Journal = Nihon Chikusan Gakkaihō·Risa ShintaniYasuo Kobayashi
Aug 6, 2021·Annual Review of Microbiology·Guillaume TahonThijs J G Ettema
Oct 2, 2021·Clinical Gastroenterology and Hepatology : the Official Clinical Practice Journal of the American Gastroenterological Association·Katelyn E MadiganRichard B Weinberg

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Methods Mentioned

BETA
PCR
biopsies
biopsy

Software Mentioned

RAxML
SILVA SINA
iTOL

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