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The R package Rsubread is easier, faster, cheaper and better for alignment and quantification of RNA sequencing reads

bioRxiv

Jul 26, 2018

Yang LiaoWei Shi

Abstract

The first steps in the analysis of RNA sequencing (RNA-seq) data are usually to map the reads to a reference genome and then to count reads by gene, by exon or by exon-exon junction. These two steps are at once the most common and also typically the most expensive computational steps in...read more

Mentioned in this Paper

Computer Software
Study of Tamoxifen and Raloxifene (STAR)
Environmental Infrastructure
Exons
Genome
Genes
Sequence Determinations, RNA
Genetic Analysis
Extracellular Matrix
Environment
103
31
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The R package Rsubread is easier, faster, cheaper and better for alignment and quantification of RNA sequencing reads

bioRxiv

Jul 26, 2018

Yang LiaoWei Shi

PMID: 990377762

DOI: 10.1101/377762

Abstract

The first steps in the analysis of RNA sequencing (RNA-seq) data are usually to map the reads to a reference genome and then to count reads by gene, by exon or by exon-exon junction. These two steps are at once the most common and also typically the most expensive computational steps in...read more

Mentioned in this Paper

Computer Software
Study of Tamoxifen and Raloxifene (STAR)
Environmental Infrastructure
Exons
Genome
Genes
Sequence Determinations, RNA
Genetic Analysis
Extracellular Matrix
Environment
103
31

Similar Papers Found In These Feeds

Gene Evolution & Mutation

The identification of precise mutations is required for a complete understanding of the underlying molecular and evolutionary mechanisms driving adaptive phenotypic chang

BioRxiv Preprints

BioRxiv is the preprint server for biology, operated by Cold Spring Harbor Laboratory. Here are the latest biology preprint articles from bioRxiv.

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