PMID: 8594608Jan 1, 1996Paper

The Ribosomal Database Project (RDP)

Nucleic Acids Research
B L MaidakC R Woese

Abstract

The Ribosomal Database Project (RDP) is a curated database that offers ribosome-related data, analysis services and associated computer programs. The offerings include phylogenetically ordered alignments of ribosomal RNA (rRNA) sequences, derived phylogenetic trees, rRNA secondary structure diagrams and various software for handling, analyzing and displaying alignments and trees. The data are available via anonymous ftp (rdp.life.uiuc.edu), electronic mail (server@rdp.life.uiuc.edu), gopher (rdpgopher.life.uiuc.edu) and World Wide Web (WWW)(http://rdpwww.life.uiuc.edu/). The electronic mail and WWW servers provide ribosomal probe checking, screening for possible chimeric rRNA sequences, automated alignment and approximate phylogenetic placement of user-submitted sequences on an existing phylogenetic tree.

References

Jan 1, 1981·Journal of Molecular Evolution·J Felsenstein
Sep 1, 1994·Nucleic Acids Research·B L MaidakC R Woese
Sep 1, 1994·Nucleic Acids Research·D A BensonJ Ostell
Sep 1, 1994·Nucleic Acids Research·D B EmmertG N Cameron
Feb 1, 1994·Computer Applications in the Biosciences : CABIOS·G J OlsenR Overbeek

❮ Previous
Next ❯

Citations

Jul 21, 2004·Folia Microbiologica·S R XiangX R Chen
Nov 11, 2009·Applied Microbiology and Biotechnology·Meyyappan ArumugamJoydeep Mukherjee
Sep 21, 2007·Current Microbiology·Christopher RathgeberVladimir Yurkov
Jan 5, 2002·Journal of Microbiological Methods·Annie RompréPatrick Laurent
Oct 7, 1998·International Journal of Food Microbiology·M MoreaP S Cocconcelli
Feb 1, 1997·Trends in Ecology & Evolution·A Purvis, D L Quicke
Mar 21, 1998·Current Opinion in Biotechnology·J Kjems, J Egebjerg
Dec 7, 2007·The ISME Journal·David BourneCarolyn Smith-Keune
Feb 25, 1999·Journal of Applied Microbiology·R A JonesI R Beacham
Mar 29, 2000·Journal of Applied Microbiology·R SatokariM L Suihko
Aug 4, 1999·Microbial Drug Resistance : MDR : Mechanisms, Epidemiology, and Disease·S K McAshanD S Thaler
Jan 1, 1996·Nucleic Acids Research·Y Van de PeerR De Wachter
Jan 1, 1996·Nucleic Acids Research·P De RijkR De Wachter
Jan 1, 1997·Nucleic Acids Research·C Zwieb, N Larsen
Jan 1, 1997·Nucleic Acids Research·B L MaidakC R Woese
Nov 9, 2000·Molecular Biology and Evolution·D S HornerT M Embley
Jul 1, 1997·The Journal of Eukaryotic Microbiology·J H Gunderson, S H Goss
Jan 16, 2007·Applied and Environmental Microbiology·Matthew S PayneDavid G Bourne
Apr 7, 2009·Applied and Environmental Microbiology·Jean-Baptiste RainaDavid G Bourne
Apr 21, 2009·Applied and Environmental Microbiology·Neslihan TasHauke Smidt
Jan 5, 2000·Applied and Environmental Microbiology·D E CummingsR F Rosenzweig
Oct 31, 2002·Applied and Environmental Microbiology·J F HeidelbergR R Colwell
Apr 27, 2002·Applied and Environmental Microbiology·Kenneth H WilsonGary L Andersen
Aug 30, 2002·Applied and Environmental Microbiology·Christopher RathgeberVladimir Yurkov
Aug 9, 2005·Applied and Environmental Microbiology·Shurong XiangJunxia Wang

❮ Previous
Next ❯

Related Concepts

Trending Feeds

COVID-19

Coronaviruses encompass a large family of viruses that cause the common cold as well as more serious diseases, such as the ongoing outbreak of coronavirus disease 2019 (COVID-19; formally known as 2019-nCoV). Coronaviruses can spread from animals to humans; symptoms include fever, cough, shortness of breath, and breathing difficulties; in more severe cases, infection can lead to death. This feed covers recent research on COVID-19.

Blastomycosis

Blastomycosis fungal infections spread through inhaling Blastomyces dermatitidis spores. Discover the latest research on blastomycosis fungal infections here.

Nuclear Pore Complex in ALS/FTD

Alterations in nucleocytoplasmic transport, controlled by the nuclear pore complex, may be involved in the pathomechanism underlying multiple neurodegenerative diseases including Amyotrophic Lateral Sclerosis and Frontotemporal Dementia. Here is the latest research on the nuclear pore complex in ALS and FTD.

Applications of Molecular Barcoding

The concept of molecular barcoding is that each original DNA or RNA molecule is attached to a unique sequence barcode. Sequence reads having different barcodes represent different original molecules, while sequence reads having the same barcode are results of PCR duplication from one original molecule. Discover the latest research on molecular barcoding here.

Chronic Fatigue Syndrome

Chronic fatigue syndrome is a disease characterized by unexplained disabling fatigue; the pathology of which is incompletely understood. Discover the latest research on chronic fatigue syndrome here.

Evolution of Pluripotency

Pluripotency refers to the ability of a cell to develop into three primary germ cell layers of the embryo. This feed focuses on the mechanisms that underlie the evolution of pluripotency. Here is the latest research.

Position Effect Variegation

Position Effect Variagation occurs when a gene is inactivated due to its positioning near heterochromatic regions within a chromosome. Discover the latest research on Position Effect Variagation here.

STING Receptor Agonists

Stimulator of IFN genes (STING) are a group of transmembrane proteins that are involved in the induction of type I interferon that is important in the innate immune response. The stimulation of STING has been an active area of research in the treatment of cancer and infectious diseases. Here is the latest research on STING receptor agonists.

Microbicide

Microbicides are products that can be applied to vaginal or rectal mucosal surfaces with the goal of preventing, or at least significantly reducing, the transmission of sexually transmitted infections. Here is the latest research on microbicides.

Related Papers

Proceedings of the National Academy of Sciences of the United States of America
C A Kofoid, O Swezy
Proceedings of the National Academy of Sciences of the United States of America
D K JemioloE J Murgola
© 2021 Meta ULC. All rights reserved