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Tools and best practices for data processing in allelic expression analysis

Genome Biology

Sep 17, 2015

Stephane E. CastelTuuli Lappalainen

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Abstract

Allelic expression analysis has become important for integrating genome and transcriptome data to characterize various biological phenomena such as cis-regulatory variation and nonsense-mediated decay. We analyze the properties of allelic expression read count data and technical sources...read more

Mentioned in this Paper

Alleles
Computer Programs and Programming
Data Interpretation, Statistical
Gene Expression
Genome
Euphoric Mood
Double Test
MRNA Differential Display
Sequence Determinations, RNA
Analysis
87
1
510
Paper Details
References
    • References30
    • Citations34
    • References30
    • Citations34
  • Tools and best practices for data processing in allelic expression analysis

    Genome Biology

    Sep 17, 2015

    Stephane E. CastelTuuli Lappalainen

    PMID: 26381377

    DOI: 10.1186/s13059-015-0762-6

    Abstract

    Allelic expression analysis has become important for integrating genome and transcriptome data to characterize various biological phenomena such as cis-regulatory variation and nonsense-mediated decay. We analyze the properties of allelic expression read count data and technical sources...read more

    Mentioned in this Paper

    Alleles
    Computer Programs and Programming
    Data Interpretation, Statistical
    Gene Expression
    Genome
    87
    1
    510
    Paper Details
    References
    • References30
    • Citations34
    • References30
    • Citations34
  • Get paper from

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