Jul 19, 2016

Towards robust evolutionary inference with integral projection models

BioRxiv : the Preprint Server for Biology
M J JaneiroM B Morrissey

Abstract

Integral projection models (IPMs) are extremely flexible tools for ecological and evolutionary inference. IPMs track the full joint distribution of phenotype in populations through time, using functions describing phenotype-dependent development, inheritance, survival and fecundity. For evolutionary inference, two important features of any model are the ability to (i) characterize relationships among traits (including values of the same traits across age) within individuals, and (ii) characterize similarity between individuals and their descendants. In IPM analyses, the former depends on regressions of observed trait values at each age on values at the previous age (development functions), and the latter on regressions of offspring values at birth on parent values as adults (inheritance functions). We show analytically that development functions, characterized this way, will typically underestimate covariances of trait values across ages, due to compounding of regression to the mean across projection steps. Similarly, we show that inheritance, characterized this way, is inconsistent with a modern understanding of inheritance, and underestimates the degree to which relatives are phenotypically similar. Additionally, we show that...Continue Reading

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Mentioned in this Paper

Fertility
Projection Defense Mechanism
Genetic Inheritance
Analysis
Sheep, Bighorn
Disease Regression
Phenotype Determination
Intercept Substance
Population Group
Inference

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