Transcriptome analysis of Spodoptera frugiperda 9 (Sf9) cells infected with baculovirus, AcMNPV or AcMNPV-BmK IT

Biotechnology Letters
Lili WeiYuejun Fu

Abstract

To analyze the transcriptome of Spodoptera frugiperda 9 (Sf9) cells infected with AcMNPV or AcMNPV-BmK IT. A comprehensive transcriptome profile for Sf9 cells infected with AcMNPV or AcMNPV-BmK IT is shown. 43127572, 46529744 and 47235310 RNA-Seq profiles permitted the quantification of expression levels for control (C), AcMNPV-BmK IT treatment (ABT) and AcMNPV treatment (AT) groups. There were 997 up-regulated or down-regulated candidate genes with significant different expression level in these treatment groups. These results provide a broad spectrum of candidate genes that are critically involved in the molecular regulation mechanism of Sf9 cells infected with AcMNPV-BmK IT.

References

Dec 11, 1999·Nucleic Acids Research·M Kanehisa, S Goto
Dec 19, 2003·Nucleic Acids Research·Todd W HarrisLincoln D Stein
Dec 21, 2004·Acta Crystallographica. Section D, Biological Crystallography·Chong LiDa Cheng Wang
May 7, 2005·Nature Biotechnology·Thomas A KostDonald L Jarvis
Jun 3, 2008·Nature Methods·Ali MortazaviBarbara Wold
Mar 23, 2012·Immunological Reviews·Thomas D Gilmore, Francis S Wolenski
Jul 4, 2012·Comparative Biochemistry and Physiology. Part B, Biochemistry & Molecular Biology·Bin Gao, Shunyi Zhu
Mar 25, 2016·Journal of Agricultural and Food Chemistry·Oscar GoñiShane O'Connell

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Citations

Feb 2, 2021·Applied Microbiology and Biotechnology·Zedi WangMingjie Jin
Apr 4, 2021·International Journal of Molecular Sciences·Pramod PanthaMaheshi Dassanayake

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Datasets Mentioned

BETA
SRP075799

Methods Mentioned

BETA
chip
Illumina sequencing
PCR

Software Mentioned

TrEMBL
BLAST
Trinity
Orfpredict

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