PMID: 8594584Jan 1, 1996Paper

TransTerm: a database of translational signals

Nucleic Acids Research
M E DalphinW P Tate

Abstract

The TransTerm database of sequence contexts of stop and start codons has been expanded to include approximately 50% more species than last year's release. It now contains 148 organisms and >39 500 coding sequences; it is now available on the World Wide Web. The database includes: (i) initiation and termination sequence contexts organized by species; (ii) summary parameters about the individual sequences (sequence length, GC%, GC3, Nc, CAI) in addition to tables of base frequencies for each species' stop and start codon sequence context; (iii) species codon usage tables; and (iv) summary tables of stop signal frequency.

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Citations

May 30, 1997·Biochimica Et Biophysica Acta·K Noben-TrauthP M Nishina
Apr 4, 1997·The Journal of Biological Chemistry·N J MorrisG E Lienhard
Nov 14, 2018·Biochemical Society Transactions·Warren P TateChris M Brown
Mar 6, 1999·The Journal of Biological Chemistry·D L Kaplan, T A Steitz

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