Ty3/gypsy-like retrotransposon sequences in tomato

Plasmid
P Y Su, T A Brown

Abstract

Polymerase chain reactions (PCRs) were carried out with DNAs of eight tomato species using primers directed at the reverse transcriptase domain of Ty3/gypsy-like LTR retrotransposons. All DNAs gave PCR products of the expected size which, after cloning and sequencing, were confirmed as representing Ty3/gypsy-like elements. The sequences were heterogeneous, only 3 of the 16 being identical and the most diverse showing 124/426 pairwise nucleotide differences. Multiple alignment and construction of neighbor joining trees divided the sequences into six groups, three comprising five, three, and five sequences respectively, and the other three containing a single sequence each.

References

Dec 1, 1977·Proceedings of the National Academy of Sciences of the United States of America·F SangerA R Coulson
Mar 1, 1992·Trends in Genetics : TIG·M A Grandbastien
Dec 1, 1992·Current Opinion in Genetics & Development·D J Finnegan
Jun 1, 1992·Molecular & General Genetics : MGG·M T McHaleR P Oliver
Jul 25, 1992·Nucleic Acids Research·A J FlavellA Kumar
Aug 1, 1992·Proceedings of the National Academy of Sciences of the United States of America·D F VoytasS R Rodermel
Mar 25, 1991·Nucleic Acids Research·K EdwardsC Thompson
Jun 21, 1991·Science·H A ErlichJ J Sninsky
Dec 1, 1990·Molecular and Cellular Biology·H L LevinJ D Boeke
Jul 15, 1986·European Journal of Biochemistry·S YukiK Saigo
Jul 1, 1989·Proceedings of the National Academy of Sciences of the United States of America·D R SmythJ W Sentry
Dec 1, 1988·Molecular and Cellular Biology·L J HansenS B Sandmeyer
Nov 17, 1988·Nature·D F Voytas, F M Ausubel
Jan 1, 1993·Molecular Plant-microbe Interactions : MPMI·K F DobinsonJ E Hamer
Nov 22, 1994·Proceedings of the National Academy of Sciences of the United States of America·M D Purugganan, S R Wessler
Feb 15, 1994·Proceedings of the National Academy of Sciences of the United States of America·A KimA Bucheton
Feb 1, 1993·Idengaku zasshi·H Hirochika, R Hirochika
Feb 1, 1996·Trends in Genetics : TIG·A Kumar
Nov 1, 1996·Science·P SanMiguelJ L Bennetzen
Sep 1, 1987·Molecular & General Genetics : MGG·N P HarberdR D Thompson

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Citations

Jun 23, 2001·Molecular Biology and Evolution·N FriesenJ S Heslop-Harrison
Dec 31, 2008·Cellular & Molecular Biology Letters·Bruna De FeliceClara Conicella
Nov 18, 2000·Genome Génome / Conseil National De Recherches Canada·S A Rogers, K P Pauls
Jul 1, 2011·Physiology and Molecular Biology of Plants : an International Journal of Functional Plant Biology·Alka SinghPrem S Srivastava
Jul 26, 2000·Molecular Biology and Evolution·R P Vázquez-ManriqueR de Frutos
Nov 11, 2003·Genome Génome / Conseil National De Recherches Canada·Soledad Sanz-AlferezJeffrey L Bennetzen

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