Undibacterium piscinae sp. nov., isolated from Korean shiner intestine

International Journal of Systematic and Evolutionary Microbiology
So-Yeon LeeJin-Woo Bae

Abstract

A novel Gram-stain-negative, non-spore-forming, obligate aerobic, motile, rod-shaped, and flagellated bacterium, designated S11R28T, was isolated from the intestinal tract of a Korean shiner, Coreoleuciscus splendidus. Based on 16S rRNA gene sequences, strain S11R28T was identified as member of the genus Undibacterium in class Betaproteobacteria, and was closely related to Undibacterium parvum DSM 23061T (98.49 %). The isolate grew at 4-25 °C, pH 6-9, with 0 % (w/v) NaCl, and grew optimally at 20 °C, pH 8, in the absence of NaCl. The main cellular fatty acids were C16 : 0 and summed features 3 (C16 : 1ω7c and/or C16 : 1ω6c). The strain possessed diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylethanolamine as predominant polar lipids, and ubiquinone Q-8 as a respiratory quinone. The polyamine profile composed of 2-hydroxyputrescine, spermidine, putrescine, and benzoic acid. A genomic DNA G+C content was 51.4 mol%. The average nucleotide identity between strains S11R28T and U. parvum DSM 23061T was 78.66 %. Thus, Undibacterium piscinae can be considered a novel species within the genus Undibacterium with the type strain S11R28T (=KCTC 62668T=JCM 33224T).

References

Dec 1, 1990·Kisaengch'unghak chapchi. The Korean journal of parasitology·D W Choi
Jul 1, 1987·Molecular Biology and Evolution·N Saitou, M Nei
Jan 1, 1981·Journal of Molecular Evolution·J Felsenstein
Jun 1, 1936·Journal of Bacteriology·R P Tittsler, L A Sandholzer
Mar 3, 2007·International Journal of Systematic and Evolutionary Microbiology·Andreas StolzPeter Kämpfer
Jul 13, 2007·International Journal of Systematic and Evolutionary Microbiology·Peter KämpferHans-Jürgen Busse
Feb 17, 1933·Science·A B Schaeffer, M D Fulton
Nov 1, 2008·The Journal of Microbiology·Seong Woon RohJin-Woo Bae
May 5, 2009·The Journal of Microbiology·Seong Woon Roh, Jin-Woo Bae
Sep 14, 2012·Nature·Craig L MaynardCasey T Weaver
Nov 20, 2012·International Journal of Systematic and Evolutionary Microbiology·Yi-Qian LiuShuang-Jiang Liu
May 7, 2013·Nature Methods·Chen-Shan ChinJonas Korlach
Sep 21, 2013·International Journal of Systematic and Evolutionary Microbiology·Soo-Jin KimSoon-Wo Kwon
Dec 10, 2013·Water Research·S JouanneauG Thouand
Jan 18, 2014·Nature Reviews. Genetics·David SimsChris P Ponting
Feb 8, 2014·International Journal of Systematic and Evolutionary Microbiology·Mincheol KimJongsik Chun
Feb 20, 2015·Gut Microbes·Bonnie P YoumansSarah K Highlander
Aug 26, 2015·International Journal of Systematic and Evolutionary Microbiology·Juan DuTae-Hoo Yi
Mar 24, 2016·Molecular Biology and Evolution·Sudhir KumarKoichiro Tamura
Jun 17, 2016·International Journal of Systematic and Evolutionary Microbiology·Peter KämpferRuben Avendaño-Herrera
Dec 23, 2016·International Journal of Systematic and Evolutionary Microbiology·Seok-Hwan YoonJongsik Chun
Feb 17, 2017·Antonie van Leeuwenhoek·Seok-Hwan YoonJongsik Chun
Oct 24, 2017·International Journal of Systematic and Evolutionary Microbiology·Wen-Ming ChenShih-Yi Sheu
Jan 3, 2018·International Journal of Systematic and Evolutionary Microbiology·Jongsik ChunMartha E Trujillo

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Citations

May 8, 2020·International Journal of Systematic and Evolutionary Microbiology·So-Yeon LeeJin-Woo Bae
Apr 29, 2021·International Journal of Systematic and Evolutionary Microbiology·Dorji PhurbuAi-Hua Li

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