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V-GAP: Viral genome assembly pipeline

Gene

Oct 18, 2015

Yoji NakamuraMitsuru Ototake

Abstract

Next-generation sequencing technologies have allowed the rapid determination of the complete genomes of many organisms. Although shotgun sequences from large genome organisms are still difficult to reconstruct perfect contigs each of which represents a full chromosome, those from small ...read more

Mentioned in this Paper

Study
Viral Genome Location
Virus
Genome
DNA, Viral
Determination Aspects
Bacteriophages
Massively-Parallel Sequencing
Reading Frames (Nucleotide Sequence)
Chromosomes
10
67
Paper Details
References
  • References14
  • Citations3
12

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V-GAP: Viral genome assembly pipeline

Gene

Oct 18, 2015

Yoji NakamuraMitsuru Ototake

PMID: 26475935

DOI: 10.1016/j.gene.2015.10.029

Abstract

Next-generation sequencing technologies have allowed the rapid determination of the complete genomes of many organisms. Although shotgun sequences from large genome organisms are still difficult to reconstruct perfect contigs each of which represents a full chromosome, those from small ...read more

Mentioned in this Paper

Study
Viral Genome Location
Virus
Genome
DNA, Viral
Determination Aspects
Bacteriophages
Massively-Parallel Sequencing
Reading Frames (Nucleotide Sequence)
Chromosomes
10
67

Similar Papers Found In These Feeds

Bacteriophage: Phage Therapy

Phage therapy uses bacterial viruses (bacteriophages) to treat bacterial infections and is widely being recognized as an alternative to antibiotics. Here is the latest research.

Oncoviral Profiles

Viral infections have been found to be responsible for causing some cancer types in humans. The collection of the viral genome gathered from cancer genome sequencing data can help identify the origin of the cancer. Here is the latest research on oncoviral profiles.

Related Papers

Bioinformatics

Meta-IDBA: a de Novo assembler for metagenomic data

BioinformaticsJune 21, 2011
Yu PengFrancis Y L Chin
BMC Genomics

Comparison of metagenomic samples using sequence signatures

BMC GenomicsDecember 28, 2012
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Paper Details
References
  • References14
  • Citations3
12
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