Versatile and open software for comparing large genomes

Genome Biology
Stefan KurtzSteven L Salzberg

Abstract

The newest version of MUMmer easily handles comparisons of large eukaryotic genomes at varying evolutionary distances, as demonstrated by applications to multiple genomes. Two new graphical viewing tools provide alternative ways to analyze genome alignments. The new system is the first version of MUMmer to be released as open-source software. This allows other developers to contribute to the code base and freely redistribute the code. The MUMmer sources are available at http://www.tigr.org/software/mummer.

References

Oct 5, 1990·Journal of Molecular Biology·Stephen F AltschulD J Lipman
Apr 1, 1988·Proceedings of the National Academy of Sciences of the United States of America·W R Pearson, D J Lipman
Jan 11, 1982·Nucleic Acids Research·J P Dumas, J Ninio
Mar 25, 1981·Journal of Molecular Biology·T F Smith, Michael S Waterman
Sep 1, 1997·Nucleic Acids Research·Stephen F AltschulD J Lipman
May 16, 1998·Genome Research·D GordonP Green
May 15, 1999·Nucleic Acids Research·A L DelcherSteven L Salzberg
Oct 6, 1999·Genome Research·Xiaoqiu Huang, A Madan
Mar 24, 2000·Science·E W MyersJ Craig Venter
Oct 10, 2001·Genome Research·Zemin NingJames C Mullikin
Nov 20, 2001·Nucleic Acids Research·Stefan KurtzR Giegerich
May 30, 2002·Nucleic Acids Research·Arthur L DelcherSteven L Salzberg
Jul 5, 2002·Genome Research·Kathryn A SwanMichael R Cancilla
Aug 10, 2002·Bioinformatics·Michael HöhlEnno Ohlebusch
Sep 10, 2002·Journal of Bacteriology·R D FleischmannClaire M Fraser
Dec 6, 2002·Nature·Mouse Genome Sequencing ConsortiumEric S Lander
Jan 17, 2003·Genome Research·James C Mullikin, Zemin Ning
Jan 17, 2003·Genome Research·Nick BrayLior Pachter
Jan 17, 2003·Genome Research·Scott SchwartzWebb Miller
Mar 26, 2003·Genome Research·Michael BrudnoSerafim Batzoglou

Citations

Nov 5, 2010·TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik·Anna Finkers-TomczakAska Goverse
May 14, 2009·Journal of Molecular Evolution·Rainer Merkl, Arnim Wiezer
May 9, 2012·Molecular Genetics and Genomics : MGG·Farbod BabrzadehBoris U Stambuk
May 17, 2013·Archives of Virology·Luis AmarillasJosefina León-Félix
May 19, 2009·European Journal of Clinical Microbiology & Infectious Diseases : Official Publication of the European Society of Clinical Microbiology·F ArmougomBernard La Scola
Feb 23, 2008·Chromosome Research : an International Journal on the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology·Thomas Faraut
Nov 30, 2013·Journal of Biosciences·Louis S TisaLuis G Wall
Dec 29, 2011·The Journal of Microbiology·Ho-Won Chang, Kyoung-Ho Kim
Jul 30, 2010·The ISME Journal·Achim QuaiserPurificación López-García
Mar 20, 2010·The ISME Journal·Charmaine NgRicardo Cavicchioli
Jul 1, 2011·The ISME Journal·Pedro Belda-FerreAlex Mira
Nov 30, 2007·Nature·Mariusz NowackiLaura F Landweber
Jul 16, 2010·Nature·Alejandro ReyesJeffrey I Gordon
Jul 26, 2013·Nature·Rajinder SinghRavigadevi Sambanthamurthi
Nov 8, 2011·Nature Biotechnology·Rajeev K VarshneyScott A Jackson
Jul 4, 2012·Nature Biotechnology·Sergey Koren Adam M Phillippy
Jul 4, 2012·Nature Biotechnology·Ali BashirEric E Schadt
Jan 29, 2013·Nature Biotechnology·Rajeev K VarshneyDouglas R Cook
Nov 3, 2010·Nature Genetics·Giovanna MorelliMark Achtman
Dec 28, 2010·Nature Genetics·Vladimir ShulaevKevin M Folta
Aug 9, 2011·Nature Genetics·Maheshi DassanayakeJohn M Cheeseman
Aug 30, 2011·Nature Genetics·Jun CaoDetlef Weigel
Aug 8, 2006·Nature Genetics·Douglas M RuderferLeonid Kruglyak
Mar 18, 2010·Nature Methods·Cydney B NielsenTing Wang
May 7, 2013·Nature Methods·Chen-Shan ChinJonas Korlach
May 15, 2013·Nature Methods·Catherine L LudlowAimée M Dudley
Mar 25, 2009·Proceedings of the National Academy of Sciences of the United States of America·Lisa KlassonSiv G E Andersson
Feb 24, 2009·Proceedings of the National Academy of Sciences of the United States of America·D R Yoder-HimesR Sorek
Oct 27, 2009·Proceedings of the National Academy of Sciences of the United States of America·Michael Richter, Ramon Rosselló-Móra
Oct 7, 2009·Proceedings of the National Academy of Sciences of the United States of America·Michael MollaSimon Kasif
Dec 19, 2009·Proceedings of the National Academy of Sciences of the United States of America·Se-Ran JunSung-Hou Kim
Apr 7, 2010·Proceedings of the National Academy of Sciences of the United States of America·Miao HeJulian Parkhill
Jun 16, 2010·Proceedings of the National Academy of Sciences of the United States of America·Anna R CorvagliaJacques Schrenzel
Nov 17, 2010·Proceedings of the National Academy of Sciences of the United States of America·Nur A HasanR R Colwell
Apr 27, 2011·Proceedings of the National Academy of Sciences of the United States of America·Lei YangSøren Molin
Jun 8, 2011·Proceedings of the National Academy of Sciences of the United States of America·Korbinian SchneebergerDetlef Weigel
Mar 7, 2012·Proceedings of the National Academy of Sciences of the United States of America·Bernadette C YoungDaniel J Wilson
Aug 1, 2012·Proceedings of the National Academy of Sciences of the United States of America·Samuel MinotJeroen P J Saeij
Mar 15, 2012·Proceedings of the National Academy of Sciences of the United States of America·Ronnie de JongeBart P H J Thomma
Jul 11, 2012·Proceedings of the National Academy of Sciences of the United States of America·Hua-Jun WuQi Xie
Jul 25, 2012·Proceedings of the National Academy of Sciences of the United States of America·Daniel J ParkSarah K Volkman
Sep 11, 2013·Proceedings of the National Academy of Sciences of the United States of America·Haibao TangAndrew H Paterson
May 23, 2013·Proceedings of the National Academy of Sciences of the United States of America·Stéphane HacquardEmiel Ver Loren van Themaat
Oct 2, 2013·Proceedings of the National Academy of Sciences of the United States of America·Kathryn E HoltStephen Baker
Mar 26, 2008·Journal of Computational Biology : a Journal of Computational Molecular Cell Biology·Enno Ohlebusch, Stefan Kurtz
Oct 21, 2010·Journal of Computational Biology : a Journal of Computational Molecular Cell Biology·Sébastien BoisvertJacques Corbeil
Jan 8, 2011·Journal of Computational Biology : a Journal of Computational Molecular Cell Biology·Nahla A Belal, Lenwood S Heath
May 14, 2011·Journal of Computational Biology : a Journal of Computational Molecular Cell Biology·Tade SouaiaiaTing Chen
Dec 14, 2011·Journal of Computational Biology : a Journal of Computational Molecular Cell Biology·Hugo Devillers, Sophie Schbath
Sep 9, 2011·Journal of Computational Biology : a Journal of Computational Molecular Cell Biology·Hugo DevillersMeriem El Karoui
Sep 21, 2011·Journal of Computational Biology : a Journal of Computational Molecular Cell Biology·Song GaoNiranjan Nagarajan
Feb 11, 2005·Omics : a Journal of Integrative Biology·Ela HuntAnna F Dominiczak
Jun 23, 2005·Omics : a Journal of Integrative Biology·Claudia B Monteiro-VitorelloMarie-Anne Van Sluys
Feb 10, 2010·Omics : a Journal of Integrative Biology·Christopher J GrimRita R Colwell
May 13, 2010·Briefings in Bioinformatics·Heng Li, Nils Homer
Jun 28, 2011·Briefings in Bioinformatics·Colin Dewey
Dec 27, 2011·Briefings in Bioinformatics·Michael C SchatzMihai Pop
Mar 5, 2005·Bioinformatics·H L ChanX Fan
Oct 15, 2005·Bioinformatics·Jacques NicolasAnne-Sophie Valin
Jul 18, 2006·Bioinformatics·Haiming WangJ C Kissinger
Feb 21, 2007·Bioinformatics·Jan KrumsiekThomas Rattei
Apr 28, 2007·Bioinformatics·Daniel C RichterDaniel H Huson
Jan 19, 2008·Bioinformatics·James Robert WhiteMihai Pop
Oct 28, 2008·Bioinformatics·Jason R MillerGranger Sutton
Apr 10, 2009·Bioinformatics·Michael C Schatz
Jun 6, 2009·Bioinformatics·Samuel AssefaMatthew Berriman
Oct 15, 2009·Bioinformatics·Mirjana Domazet-Loso, Bernhard Haubold
Dec 18, 2009·Bioinformatics·Peter Husemann, Jens Stoye
Sep 9, 2010·Bioinformatics·Abhilash SrikanthaRangavittal Narayanan
Dec 15, 2010·Bioinformatics·Samuel V Angiuoli, Steven L Salzberg
Dec 16, 2010·Bioinformatics·Bernhard HauboldPeter Pfaffelhuber
Aug 4, 2011·Bioinformatics·Aaron E DarlingMarc T Facciotti
Sep 10, 2011·Bioinformatics·Tanja Magoc, Steven L Salzberg
Sep 20, 2011·Bioinformatics·Sergey KorenMihai Pop
Aug 28, 2012·Bioinformatics·Kristoffer SahlinLars Arvestad
Oct 13, 2012·Bioinformatics·Nuno A FonsecaJohn C Marioni
Oct 30, 2012·Bioinformatics·Alexander DobinThomas R Gingeras
Jan 1, 2013·Bioinformatics·Nilgun Donmez, Michael Brudno
Jan 26, 2013·Bioinformatics·Michaël VyvermanPeter Dawyndt
Feb 21, 2013·Bioinformatics·Alexey GurevichGlenn Tesler
May 15, 2013·Bioinformatics·Tanja MagocSteven L Salzberg
Jul 12, 2013·Bioinformatics·Travis J Wheeler, Sean R Eddy
Jul 19, 2013·Bioinformatics·Matija Korpar, Mile Šikić
Aug 31, 2013·Bioinformatics·Aleksey V ZiminJames A Yorke
Sep 26, 2013·Bioinformatics·Bernhard HauboldPeter Pfaffelhuber
Feb 10, 2012·Clinical Infectious Diseases : an Official Publication of the Infectious Diseases Society of America·Chinyere OkoroMelita A Gordon
Mar 30, 2011·DNA Research : an International Journal for Rapid Publication of Reports on Genes and Genomes·Leonie DoorduinKlaas Vrieling
Sep 9, 2011·DNA Research : an International Journal for Rapid Publication of Reports on Genes and Genomes·Takeshi AkaoHitoshi Shimoi
Dec 24, 2011·DNA Research : an International Journal for Rapid Publication of Reports on Genes and Genomes·Yu KanesakiHirofumi Yoshikawa
Jan 1, 2009·Genome Biology and Evolution·Olga ZhaxybayevaJ Peter Gogarten
Nov 20, 2012·Genome Biology and Evolution·Jarrett D Morrow, Vaughn S Cooper
Mar 12, 2013·Genome Biology and Evolution·Laura E Williams, Jennifer J Wernegreen
May 11, 2013·Genome Biology and Evolution·Takayasu WatanabeIchiro Nakagawa
Jun 5, 2013·Genome Biology and Evolution·Mario López-PérezFrancisco Rodriguez-Valera
Jul 23, 2013·Genome Biology and Evolution·Romain Blanc-MathieuGwenaël Piganeau
Nov 10, 2013·Genome Biology and Evolution·Zuowei WuQijing Zhang
Jun 14, 2008·Molecular Biology and Evolution·Lisa KlassonJulian Parkhill
Jul 2, 2010·Molecular Biology and Evolution·Enrico NegrisoloLuca Bargelloni
Feb 8, 2013·Molecular Biology and Evolution·Jinkui ChengZhihua Liu
Jun 25, 2004·Nucleic Acids Research·Kelly A FrazerInna L Dubchak
Jun 28, 2005·Nucleic Acids Research·Sacha A F T van HijumJan Kok
Dec 31, 2005·Nucleic Acids Research·Jeremy D GlasnerNicole T Perna
Jan 7, 2006·Nucleic Acids Research·Xiaoqiu HuangRichard K Wilson
Dec 22, 2006·Nucleic Acids Research·Xiaoqiu Huang, Douglas L Brutlag
Dec 5, 2006·Nucleic Acids Research·Eric E SnyderBruno W Sobral
Nov 7, 2007·Nucleic Acids Research·Roy R ChaudhuriMark J Pallen
Oct 22, 2009·Nucleic Acids Research·Lauren M BrinkacGranger Sutton
Feb 11, 2011·Nucleic Acids Research·Thomas D OttoMatthew Berriman
Mar 15, 2011·Nucleic Acids Research·Carol SoderlundWilliam M Nelson
May 16, 2012·Nucleic Acids Research·Michaël VyvermanPeter Dawyndt
Sep 4, 2012·Nucleic Acids Research·Christian TagwerkerClyde A Hutchison
Jan 13, 2006·Molecular Plant-microbe Interactions : MPMI·Dean W GabrielNatalia Mikhailova
May 8, 2009·Genome Research·Xuehui HuangBin Han
Oct 9, 2009·Genome Research·Juan Lucas ArguesoGonçalo A G Pereira
Jan 7, 2011·Genome Research·Szymon M KiełbasaMartin C Frith
Dec 8, 2011·Genome Research·Steven L SalzbergJames A Yorke
May 21, 2013·Genome Research·Ronnie de JongeBart P H J Thomma
Jul 7, 2005·Genome Research·Eric J AlmAdam P Arkin
Sep 25, 2009·Cold Spring Harbor Symposia on Quantitative Biology·J E Barrick, R E Lenski
Aug 4, 2011·Plant Physiology·Ya-Long GuoDetlef Weigel
Jul 6, 2013·Science·Jeremiah J FaithJeffrey I Gordon
Nov 16, 2013·Science·Christopher E Ellison, Doris Bachtrog
Jul 13, 2011·Antimicrobial Agents and Chemotherapy·Vinod KumarJames R Brown
Apr 17, 2012·Applied and Environmental Microbiology·Omar Sepúlveda-RoblesGabriel Guarneros
Apr 3, 2007·Applied and Environmental Microbiology·Gary XieMark J McBride
Jul 6, 2006·Applied and Environmental Microbiology·Laura E WilliamsAnne O Summers
Dec 9, 2008·Applied and Environmental Microbiology·Ralf RosensteinFriedrich Götz
Jan 15, 2013·Applied and Environmental Microbiology·François P DouillardWillem M de Vos
Oct 18, 2011·Applied and Environmental Microbiology·José M GonzálezCarlos Pedrós-Alió
Jan 17, 2012·Applied and Environmental Microbiology·L Farris HannaRobert A Edwards
Mar 7, 2006·Applied and Environmental Microbiology·Daniël van der LelieJohn Dunn
Oct 30, 2012·Eukaryotic Cell·Martijn Staats, Jan A L van Kan
Mar 22, 2013·Genome Announcements·Thaís Cabrera Galvão RojasWanderley Dias da Silveira
Jun 22, 2013·Genome Announcements·Russell DurrettDavid Dubnau
Nov 29, 2013·Genome Announcements·Xiaochun YangGuicheng Huo
Dec 21, 2013·Genome Announcements·Jeremy W Schroeder, Lyle A Simmons
Mar 31, 2012·Journal of Bacteriology·Michael S M BrouwerAdam P Roberts
May 18, 2010·Journal of Bacteriology·Thomas R IoergerJames C Sacchettini
Mar 15, 2011·Journal of Bacteriology·Chun-Chen ChenShu-Ying Li
May 24, 2011·Journal of Bacteriology·Wolfgang Florian FrickeThomas A Cebula
May 15, 2012·Journal of Bacteriology·Thaís Cabrera Galvão RojasWanderley Dias da Silveira
May 15, 2012·Journal of Bacteriology·Jeffrey B KaplanNataliya V Balashova
May 19, 2009·Journal of Bacteriology·Maria Pia Di BonaventuraPaul J Planet
Aug 31, 2010·Journal of Bacteriology·Zhuofei XuRui Zhou
Jul 1, 2008·Journal of Bacteriology·Gyung Tae ChungCheon Kwon Yoo
Sep 30, 2008·Journal of Bacteriology·W Michael McShanDragutin J Savic
Jul 21, 2012·Journal of Bacteriology·Haeyoung JeongSoo-Keun Choi
Jan 11, 2011·Journal of Bacteriology·Cristina LandetaDavid Romero
Nov 4, 2008·Journal of Bacteriology·Marc DelogerMarie-Agnès Petit
Oct 30, 2012·Journal of Bacteriology·Sang-Jae LeeDong-Woo Lee
Dec 17, 2009·Journal of Bacteriology·Azra YasminMalcolm J Horsburgh
Dec 25, 2010·Journal of Bacteriology·Scott A BeatsonIan R Henderson
Dec 25, 2010·Journal of Bacteriology·Longjiang FanDaguang Cai
Feb 10, 2009·Journal of Bacteriology·Jeffrey T FosterPaul Keim
Dec 31, 2008·Journal of Bacteriology·Steven L SalzbergNorman H Lee
Dec 5, 2012·Journal of Bacteriology·Bao-Gui JiangWu-Chun Cao
Dec 5, 2012·Journal of Bacteriology·Jan-Jaap WesselinkJesús Mingorance
Jan 9, 2007·Journal of Bacteriology·Athanasios LykidisNikos C Kyrpides
May 17, 2011·Journal of Bacteriology·Pan HuMeilin Jin
Jun 21, 2011·Journal of Bacteriology·Tiruvayipati Suma AvasthiNiyaz Ahmed
Sep 15, 2011·Journal of Bacteriology·Dayananda SiddavattamNiyaz Ahmed
Feb 14, 2012·Journal of Bacteriology·Haeyoung JeongSeung-Hwan Park
Aug 21, 2012·Journal of Bacteriology·Lavanya RishishwarI King Jordan
Feb 14, 2012·Journal of Bacteriology·Alexander BolotinAlexei Sorokin
Mar 1, 2012·Journal of Bacteriology·Sandrine AugerAlexei Sorokin
Mar 1, 2012·Journal of Bacteriology·Stefan WeidnerMichael Göttfert
May 17, 2013·Journal of Virology·Kazima SairaINSIGHT FLU003 Study Group
Jun 14, 2013·MBio·Alessandro MuzziClaudio Donati
Aug 15, 2013·MBio·Benjamin P HowdenTimothy P Stinear
Mar 7, 2013·MBio·Prerak DesaiMichael McClelland
Sep 24, 2004·Journal of Molecular Microbiology and Biotechnology·Birgit VeithGerhard Gottschalk
Jul 14, 2011·Veterinary Research·Emily N BarkerSéverine Tasker
Jul 17, 2009·BMC Bioinformatics·Serdar BozdagStefano Lonardi
Sep 18, 2009·BMC Bioinformatics·Adam M PhillippySteven L Salzberg
Feb 28, 2009·BMC Bioinformatics·Mohammad Sajjad HossainSteven Skiena
Apr 20, 2010·BMC Bioinformatics·Benedikt ZacherAchim Tresch
May 4, 2010·BMC Bioinformatics·Ryuichiro Nakato, Osamu Gotoh
Jan 14, 2010·BMC Bioinformatics·Thomas K Wolfgruber, Gernot G Presting
Jun 25, 2010·BMC Bioinformatics·Ravi Vijaya SatyaJaques Reifman
Sep 14, 2010·BMC Bioinformatics·Sergey KorenGranger Sutton
Dec 17, 2010·BMC Bioinformatics·Minh Duc CaoLloyd Allison
Jun 21, 2011·BMC Bioinformatics·Nicolas PhilippeEric Rivals
Mar 5, 2011·BMC Bioinformatics·Jorge DuitamaIon I Măndoiu
Aug 4, 2012·BMC Bioinformatics·Henry C LinMihai Pop
May 9, 2012·BMC Bioinformatics·Giorgio Gonnella, Stefan Kurtz
May 16, 2012·BMC Bioinformatics·Zanoni DiasJoão C Setubal
Jan 11, 2013·BMC Bioinformatics·Xiao-Long WuJian Ma
May 2, 2012·BMC Bioinformatics·Chengxi YeDouglas W Yu
Feb 26, 2013·BMC Bioinformatics·Jan P Meier-KolthoffMarkus Göker
Feb 26, 2014·BMC Bioinformatics·Hayssam SoueidanMacha Nikolski
May 7, 2004·BMC Bioinformatics·Srikanth CelamkotiDonald Seto
May 9, 2006·BMC Bioinformatics·Jijoy Joseph, Roschen Sasikumar
May 9, 2006·BMC Bioinformatics·Mohammad AnwarMarcel Turcotte
Oct 5, 2006·BMC Bioinformatics·William A Stokes, Benjamin S Glick
Oct 24, 2006·BMC Bioinformatics·Chunguang Liang, Thomas Dandekar
Jan 16, 2007·BMC Bioinformatics·Guoqing LuEtsuko N Moriyama
Dec 12, 2007·BMC Bioinformatics·Michael C SchatzAmitabh Varshney
Feb 20, 2008·BMC Bioinformatics·Alvaro J González, Li Liao
Jan 11, 2008·BMC Bioinformatics·Andreas DöringKnut Reinert
Jan 12, 2008·BMC Bioinformatics·Scott ChristleyGreg Madey
Apr 12, 2008·BMC Bioinformatics·Ravi Vijaya SatyaJaques Reifman
Sep 11, 2008·BMC Bioinformatics·Thomas D OttoWim M Degrave
Sep 17, 2008·BMC Bioinformatics·Yoshiyuki OhtsuboMasataka Tsuda
Dec 12, 2012·BMC Evolutionary Biology·Taewoo RyuTimothy Ravasi
May 15, 2012·BMC Evolutionary Biology·Lionel GuySiv G E Andersson
Nov 22, 2013·BMC Evolutionary Biology·Koldo Garcia-Etxebarria, Begoña M Jugo
Aug 6, 2009·BMC Genomics·Stéphane AudicHolger C Scholz
Dec 3, 2009·BMC Genomics·Lejla PasićFrancisco Rodriguez-Valera
Oct 27, 2010·BMC Genomics·Amit BahlDavid S Roos
Apr 1, 2011·BMC Genomics·Jun WangGe Gao
Aug 10, 2011·BMC Genomics·Nabil-Fareed AlikhanScott A Beatson
May 16, 2012·BMC Genomics·Nancy ChenAndrew G Clark
Jul 18, 2012·BMC Genomics·Darren L SmithHeather E Allison
Nov 28, 2012·BMC Genomics·Sebastián Aguilar PierléKelly A Brayton
Mar 20, 2013·BMC Genomics·Andrew G SharpeKirstin E Bett
Apr 17, 2013·BMC Genomics·Isabelle Rosinski-ChupinPhilippe Glaser
Oct 5, 2013·BMC Genomics·Jason G PowersPatrick Hurban
Feb 2, 2013·BMC Genomics·Gianni LitiConrad A Nieduszynski
Nov 28, 2013·BMC Genomics·Nikolai V RavinKonstantin G Skryabin
Oct 28, 2006·BMC Genomics·Thomas WickerNils Stein
Oct 23, 2008·BMC Genomics·Ravi Vijaya SatyaJaques Reifman
Dec 6, 2008·BMC Genomics·Irene L G NewtonColleen M Cavanaugh
Apr 17, 2008·BMC Genomics·Wei Lix Shirley Liu
Jun 28, 2007·BMC Microbiology·Christopher A DesjardinsVishvanath Nene
Nov 29, 2012·EURASIP Journal on Bioinformatics & Systems Biology·Bilal WajidHazem Nounou
Jan 6, 2010·Algorithms for Molecular Biology : AMB·Peter Husemann, Jens Stoye
Jun 23, 2011·Source Code for Biology and Medicine·Marco GalardiniAlessio Mengoni
Sep 10, 2011·Source Code for Biology and Medicine·Ravi Vijaya SatyaJaques Reifman
Nov 26, 2013·Source Code for Biology and Medicine·Genivaldo Gz SilvaRobert Edwards
Apr 12, 2013·Microbial Informatics and Experimentation·David J Edwards, Kathryn E Holt
Feb 8, 2005·Genome Biology·Alexis DufresneFrédéric Partensky
Mar 19, 2005·Genome Biology·Steven L SalzbergWilliam C Nelson
Oct 14, 2006·Genome Biology·Daniel G LeeFrederick M Ausubel
Mar 14, 2007·Genome Biology·Michael C SchatzSteven L Salzberg
Mar 18, 2008·Genome Biology·Adam M PhillippyMihai Pop
Mar 20, 2008·Genome Biology·Jonathan E AllenTom R Slezak
Apr 28, 2009·Genome Biology·Aleksey V ZiminSteven L Salzberg
Jan 6, 2010·Genome Biology·Peter E ChenTimothy D Read
Dec 1, 2010·Genome Biology·David R KelleySteven L Salzberg
Mar 12, 2010·Genome Biology·David R Kelley, Steven L Salzberg
May 25, 2011·Genome Biology·James K HaneRichard P Oliver
Dec 15, 2012·Genome Biology·Niranjan NagarajanYijun Ruan
Dec 25, 2012·Genome Biology·Sébastien BoisvertJacques Corbeil
Jul 3, 2013·Genome Biology·Michael C SchatzSven-Eric Schelhorn
Sep 17, 2013·Genome Biology·Sergey KorenAdam M Phillippy
May 2, 2012·Genome Biology·Michael C SchatzW Richard McCombie
Mar 1, 2012·PLoS Biology·Hinsby Cadillo-QuirozRachel J Whitaker
May 22, 2007·PLoS Computational Biology·Adam M PhillippySteven L Salzberg
Sep 27, 2008·PLoS Computational Biology·Steven L SalzbergVincent T Lee
May 30, 2009·PLoS Computational Biology·Robert K BradleyLior Pachter
Apr 18, 2013·PLoS Computational Biology·Lauren M BraggGene W Tyson
Apr 28, 2010·PLoS Genetics·Muniyandi NagarajanGaël Yvert
Mar 17, 2011·PLoS Neglected Tropical Diseases·Oscar FranzénBjörn Andersson
Oct 27, 2011·PLoS Neglected Tropical Diseases·David M EngelthalerApichai Tuanyok
Nov 13, 2012·PLoS Neglected Tropical Diseases·Jessica N RicaldiMichael A Matthias
May 23, 2013·PLoS Neglected Tropical Diseases·Ronnie G GavilanJaime Martinez-Urtaza
Aug 30, 2007·PloS One·Stephen B Beres, James M Musser
Sep 20, 2007·PloS One·Ana-Belen Martin-CuadradoFrancisco Rodriguez-Valera
Oct 18, 2008·PloS One·Daniela Puiu, Steven L Salzberg
Apr 25, 2009·PloS One·Tanja WoykeRamunas Stepanauskas
Mar 30, 2011·PloS One·Mohamed S DoniaEric W Schmidt
May 12, 2011·PloS One·Giuseppe Narzisi, Bud Mishra
Sep 3, 2011·PloS One·Hugh A YoungChristian M Tobias
Nov 1, 2011·PloS One·Pedro Belda-FerreAlex Mira
Nov 1, 2011·PloS One·Linnéa Smeds, Axel Künstner
Nov 19, 2011·PloS One·Caroline Le MaréchalYves Le Loir
Dec 17, 2011·PloS One·Mihail R HalachevMark J Pallen
Jun 6, 2012·PloS One·Armand E K DichosaCliff S Han
Oct 3, 2012·PloS One·Yan Ming ZhangWen Xin Chen
Oct 19, 2012·PloS One·Alejandro Manzano-MarínAmparo Latorre
Nov 21, 2012·PloS One·Susan JosephStephen J Forsythe
Jan 10, 2013·PloS One·Robert Lindner, Caroline C Friedel
Apr 5, 2013·PloS One·Steven RingquistMassimo Trucco
Apr 5, 2013·PloS One·Shin-Hung Lin, Yu-Chieh Liao
Apr 18, 2013·PloS One·Yaoliang ChenRui Chen
May 10, 2013·PloS One·Hamed HeydariSiew Woh Choo
Jul 5, 2013·PloS One·Michael D Barton, Hazel A Barton
Sep 26, 2013·PloS One·Dmitriy IgnatovTatyana Azhikina
Oct 3, 2013·PloS One·Marco ScortichiniGiuseppe Firrao
Jan 30, 2014·PloS One·Marcus M SoliaiCraig E Coleman
Aug 11, 2011·PLoS Pathogens·Joshua Chang MellRosemary J Redfield
Sep 13, 2012·PLoS Pathogens·Daniel J Wilson
Nov 4, 2009·Genetics·Alan Hodgkinson, Adam Eyre-Walker
Nov 2, 2013·Euro Surveillance : Bulletin Européen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin·L A SnyderD A Ala'Aldeen
Feb 5, 2011·Emerging Infectious Diseases·David M EngelthalerS Arunmozhi Balajee
Jul 31, 2012·Emerging Infectious Diseases·Erin P PricePaul Keim
Jun 21, 2011·Yi chuan = Hereditas·Hai-Rong DuanMo-Li Huang
Feb 10, 2011·Standards in Genomic Sciences·Alexander F AuchMarkus Göker
Apr 22, 2014·PloS One·Morgan GaiaBernard La Scola
Jul 1, 2014·BMC Bioinformatics·Neda ZamaniManfred G Grabherr
Sep 14, 2013·The ISME Journal·Jody J WrightSteven J Hallam
Nov 10, 2013·Molecular Plant-microbe Interactions : MPMI·Nelson A WulffDean W Gabriel