Within-Host Viral Diversity: A Window into Viral Evolution.

Annual Review of Virology
Adam S. Lauring

Abstract

The evolutionary dynamics of a virus can differ within hosts and across populations. Studies of within-host evolution provide an important link between experimental studies of virus evolution and large-scale phylodynamic analyses. They can determine the extent to which global processes are recapitulated on local scales and how accurately experimental infections model natural ones. They may also inform epidemiologic models of disease spread and reveal how host-level dynamics contribute to a virus's evolution at a larger scale. Over the last decade, advances in viral sequencing have enabled detailed studies of viral genetic diversity within hosts. I review how within-host diversity is sampled, measured, and expressed, and how comparative studies of viral diversity can be leveraged to elucidate a virus's evolutionary dynamics. These concepts are illustrated with detailed reviews of recent research on the within-host evolution of influenza virus, dengue virus, and cytomegalovirus.

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Citations

May 27, 2020·Journal of Cellular Physiology·Roghayeh SheervalilouZiba Nazarlou
May 11, 2021·Frontiers in Microbiology·David J PascallLena Wilfert
Jun 22, 2021·Current Opinion in Virology·Lara FuhrmannNiko Beerenwinkel
Nov 25, 2021·Microbiology Spectrum·Jesse D DeereChristopher J Miller
Nov 28, 2021·Nature Communications·Asher LeeksMelanie Ghoul

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