Woody forages effect the intestinal bacteria diversity of golden pompano Trachinotus ovatus

AMB Express
Biao ChenQing Pan

Abstract

To understand the effect of woody forages on golden pompano (Trachinotus ovatus) intestinal bacteria diversity and exploit new aquafeed ingredients, the diets of Moringa oleifera Lam (MOL), Broussonetia papyrifera (BP), Neolamarckia cadamba (NC) and Folium mori (FM) formulated with 70% of reference (Ref) diet and 30% of the four woody plants leaves were fed to golden pompano with initial body weight of 34.4 ± 0.5 g for 56 days, respectively. Bacteria diversity of golden pompano intestine and tank water (W) samples were analyzed using high-throughput illumina sequencing and the result indicated that the dominate phyla of golden pompano intestine were Proteobacteria, Bacteroidetes, Firmicutes and Fusobacteria. Proteobacteria in BP was significantly higher than those in NC (P < 0.05). Firmicutes in NC were significantly higher than those in BP and FM (P < 0.05). At genera level, Lactobacillus in NC was significantly higher than those in BP, MOL and FM groups (P < 0.05). The PCoA and heat map analyses showed that the intestinal bacteria community of golden pompano fed with woody forages and Ref diet presented higher similarity and the bacteria community of golden pompano intestine were clearly distinguished from those of W. Phyloge...Continue Reading

Associated Clinical Trials

References

Jul 18, 2003·Systematic and Applied Microbiology·Sydney M FinegoldPaul A Lawson
Dec 8, 2005·Applied and Environmental Microbiology·Catherine Lozupone, Rob Knight
Jul 16, 2008·Clinical Microbiology Reviews·Anton Y PelegDavid L Paterson
Apr 13, 2010·Nature Methods·J Gregory CaporasoRob Knight
Aug 17, 2010·Bioinformatics·Robert C Edgar
May 6, 2011·The American Journal of Clinical Nutrition·Reiner JumpertzJonathan Krakoff
Mar 16, 2013·Veterinary Microbiology·Marcelo Nagem Valério de OliveiraGarret Suen
Nov 22, 2013·FEMS Microbiology Ecology·Jiajia NiTanglin Zhang
Apr 1, 2014·Archives of Medical Research·Hai-Ning YuUndurti N Das
Jul 26, 2014·Bioinformatics·Donovan H ParksRobert G Beiko
May 16, 2015·PloS One·Laura BaldoWalter Salzburger
Oct 5, 2015·Applied Microbiology and Biotechnology·Xun YanMin Zhao
May 1, 2016·Applied and Environmental Microbiology·Victor SchmidtChristopher Good
Feb 9, 2017·Applied Microbiology and Biotechnology·Yaoyue WangYuxin Yang

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Datasets Mentioned

BETA
SRP115358

Methods Mentioned

BETA
PCR

Software Mentioned

QIIME
UCHIME
FLASH
Trimmomatic
PICRUSt
UCLUST
PyNAST
MOTHUR
SPSS

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